The Peptide CommonsEst. May 2024
Independent. We sell nothing and are affiliated with no manufacturer or pharmacy. Every moderation action is logged in public
Analytics · Method validation · continued

Coming back to: When to suspect the method rather than the sample posts 31–60

This is a continuation of a long topic, addressed by post number rather than by page. Start at post 1 · go to the accepted answer.

SS
s.silvaTL25 Dec 2024#31
EF
e.ferrariTL2 Moderator5 Dec 2024#32
a.amankwah, post #8: Thank you for the correction. I have edited my earlier post with a note rather than silently, so the thread still makes sense to read. The error was mine and it was the kind that comes from remembering a figure instead of looking it up. Go to post

Transfer between laboratories: a method can be transferred from one lab to another, but the receiving lab needs to demonstrate that they can achieve the same performance. This requires comparative testing and sometimes small method refinements.

19 likes in reply to #8 20mo
K
KnowltonTL3Regular6 Dec 2024#33

Thank you for the correction. I have edited my earlier post with a note rather than silently, so the thread still makes sense to read. The error was mine and it was the kind that comes from remembering a figure instead of looking it up.

0 likes 20mo
EK
e.kimaniTL2 Moderator6 Dec 2024#34

Specificity: the method can distinguish the intended compound from related impurities and degradation products. Tested by comparing results on pure compounds, mixtures of compounds, and degraded samples.

0 likes 20mo
V
VThorvaldsenTL3Regular6 Dec 2024#35
s.lindqvist, post #4: This follows post #2 rather than contradicting it. Accuracy: the method measures what you intend to measure. For purity methods, this is tested by spike-and-recover experiments: add a known amount of impurity to a sample and measure whether you recover the added amount. Go to post

System suitability: injections run at the start of a batch to establish that the instrument and column are performing. Acceptance criteria typically include replicate precision (RSD ≤2%), peak tailing (0.8–1.5), theoretical plates (>2000), and resolution (>1.5).

5 likes in reply to #4 20mo
SA
s.achebeTL2 Moderator6 Dec 2024#36

Forced degradation studies: deliberately stress the material with acid, base, oxidant, heat, light to generate degradation products and demonstrate that the method can separate them from the parent peak. Acceptance is that the method is stability-indicating.

13 likes 20mo
NT
n.torrenceTL3Regular7 Dec 2024#37

Range: the concentration range over which the method has been validated. Going outside the validated range is going outside the method's demonstrated performance.

27 likes 20mo
IR
i.rasmussenTL2 Moderator7 Dec 2024 · edited#38

On post #34 — agreed on the reasoning, with one qualification.

Having read the exchange above, I think I was wrong earlier in this topic and I want to say so plainly rather than quietly editing.

The correction was fair and I had been repeating something I had not checked carefully enough.

0 likes 20mo
SP
s.poulsenTL3Regular7 Dec 2024#39

Thank you for the correction. I have edited my earlier post with a note rather than silently, so the thread still makes sense to read. The error was mine and it was the kind that comes from remembering a figure instead of looking it up.

18 likes 20mo
EK
e.krastevTL2 Moderator7 Dec 2024#40
r.weiss, post #18: Practical note that does not fit anywhere else. Whatever you conclude from this topic, write down what you did and when. The single most useful thing in your own records is not any individual result; it is that they are dated and consecutive. Go to post

I read post #38 twice before replying, because I had assumed the opposite.

Limits of detection and quantitation: LOD is the lowest concentration that produces a signal above background. LOQ is the lowest concentration at which the method meets precision and accuracy acceptance criteria. Both are determined empirically.

0 likes in reply to #18 20mo
JB
j.baptistaTL2 Moderator7 Dec 2024#41

Coming back to post #39, because the follow-up matters more than the original answer.

Stability-indicating method: one that can separate a compound from its degradation products. Critical for assay methods that claim to measure actual degradation (as opposed to purity, which is orthogonal).

2 likes 20mo
CD
c.dahlbergTL2 Moderator8 Dec 2024#42

Picking up post #39: that is the part I would want checked first.

Why two laboratories may disagree: after validating the same method, they may still report different purity on the same sample due to integration differences, column age differences, subtle differences in mobile phase pH or temperature. This is normal and not a sign that one is wrong.

0 likes 20mo
IC
i.coelhoTL2 Moderator8 Dec 2024#43
g.tamm, post #29: Worth separating two things that post #25 runs together. Robustness: the method gives consistent results when minor parameters vary. Tested by deliberately varying pH, temperature, flow rate, and mobile phase composition within reasonable ranges and demonstrating that results stay within acceptance. Go to post

Linearity: the detector response is proportional to compound concentration across the working range. Demonstrated by running standards at multiple concentrations and showing R-squared values typically ≥0.99.

19 likes in reply to #29 20mo
DP
d.petrescuTL2 Moderator8 Dec 2024 · edited#44
a.wikstrom, post #20: On post #16 — agreed on the reasoning, with one qualification. Limits of detection and quantitation: LOD is the lowest concentration that produces a signal above background. LOQ is the lowest concentration at which the method meets precision and accuracy acceptance criteria. Both are determined empirically. Go to post

Precision and repeatability: within-run and between-run variability of the method. Acceptance criterion is typically a relative standard deviation of ≤2% for area measurements.

8 likes in reply to #20 20mo
JH
j.hartmannTL28 Dec 2024#45
P
PSkarbekTL3Regular9 Dec 2024#46

This follows post #43 rather than contradicting it.

I disagree with the reply above, and I think the disagreement is substantive rather than terminological.

The distinction being drawn does not survive when you look at the published data for this specific question. I would be glad to be shown wrong on this, because the version I am arguing against is more convenient.

0 likes 20mo
BR
b.restrepoTL2 Moderator9 Dec 2024#47

Robustness: the method gives consistent results when minor parameters vary. Tested by deliberately varying pH, temperature, flow rate, and mobile phase composition within reasonable ranges and demonstrating that results stay within acceptance.

13 likes 20mo
BM
buffer_marginTL3Regular9 Dec 2024#48
fr.translation_mo, post #17: Stability-indicating method: one that can separate a compound from its degradation products. Critical for assay methods that claim to measure actual degradation (as opposed to purity, which is orthogonal). Go to post

Accuracy: the method measures what you intend to measure. For purity methods, this is tested by spike-and-recover experiments: add a known amount of impurity to a sample and measure whether you recover the added amount.

4 likes in reply to #17 20mo
BD
baseline_driftTL2Analytical chemist9 Dec 2024#49

Having read the exchange above, I think I was wrong earlier in this topic and I want to say so plainly rather than quietly editing.

The correction was fair and I had been repeating something I had not checked carefully enough.

0 likes 20mo
NK
n.krastevTL2 Moderator9 Dec 2024 · edited#50

Linearity: the detector response is proportional to compound concentration across the working range. Demonstrated by running standards at multiple concentrations and showing R-squared values typically ≥0.99.

27 likes 20mo
AW
ai.wikstromTL210 Dec 2024#51
TS
t.steenkampTL2Member10 Dec 2024#52
sa.rasmussen, post #25: Accuracy: the method measures what you intend to measure. For purity methods, this is tested by spike-and-recover experiments: add a known amount of impurity to a sample and measure whether you recover the added amount. Go to post

Worth separating two things that post #48 runs together.

Specificity: the method can distinguish the intended compound from related impurities and degradation products. Tested by comparing results on pure compounds, mixtures of compounds, and degraded samples.

7 likes in reply to #25 20mo
KA
k.adeyemiTL2 Moderator10 Dec 2024#53
n.torrence, post #37: Range: the concentration range over which the method has been validated. Going outside the validated range is going outside the method's demonstrated performance. Go to post

Stability-indicating method: one that can separate a compound from its degradation products. Critical for assay methods that claim to measure actual degradation (as opposed to purity, which is orthogonal).

24 likes in reply to #37 20mo
AD
ambient_draftTL3Regular10 Dec 2024 · edited#54

Transfer between laboratories: a method can be transferred from one lab to another, but the receiving lab needs to demonstrate that they can achieve the same performance. This requires comparative testing and sometimes small method refinements.

0 likes 20mo
MM
m.marchettiTL2 Moderator10 Dec 2024#55

Robustness: the method gives consistent results when minor parameters vary. Tested by deliberately varying pH, temperature, flow rate, and mobile phase composition within reasonable ranges and demonstrating that results stay within acceptance.

3 likes 20mo
LS
l.sarkissianTL2Member11 Dec 2024#56
l.vukovic, post #21: Linearity: the detector response is proportional to compound concentration across the working range. Demonstrated by running standards at multiple concentrations and showing R-squared values typically ≥0.99. Go to post

On post #52 — agreed on the reasoning, with one qualification.

System suitability: injections run at the start of a batch to establish that the instrument and column are performing. Acceptance criteria typically include replicate precision (RSD ≤2%), peak tailing (0.8–1.5), theoretical plates (>2000), and resolution (>1.5).

11 likes in reply to #21 20mo
CN
c.nybergTL2 Moderator11 Dec 2024#57

Precision and repeatability: within-run and between-run variability of the method. Acceptance criterion is typically a relative standard deviation of ≤2% for area measurements.

32 likes 20mo
HH
h.hutchingsTL1Member11 Dec 2024#58

Having read the exchange above, I think I was wrong earlier in this topic and I want to say so plainly rather than quietly editing.

The correction was fair and I had been repeating something I had not checked carefully enough.

0 likes 20mo
SV
sa.vogelTL2 Moderator11 Dec 2024#59
s.grigorescu, post #28: Picking up post #25: that is the part I would want checked first. Thank you for the correction. I have edited my earlier post with a note rather than silently, so the thread still makes sense to read. The error was mine and it was the kind that comes from remembering a figure instead of looking it up. Go to post

Range: the concentration range over which the method has been validated. Going outside the validated range is going outside the method's demonstrated performance.

6 likes in reply to #28 20mo
CD
cannula_driftTL3Regular12 Dec 2024#60
j.baptista, post #41: Coming back to post #39, because the follow-up matters more than the original answer. Stability-indicating method: one that can separate a compound from its degradation products. Critical for assay methods that claim to measure actual degradation (as opposed to purity, which is orthogonal). Go to post

Limits of detection and quantitation: LOD is the lowest concentration that produces a signal above background. LOQ is the lowest concentration at which the method meets precision and accuracy acceptance criteria. Both are determined empirically.

16 likes in reply to #41 20mo